The runs which go through might appear while your app is open (or not yet suspended after returning to the home screen) - at least this is the behavior at my side.
In the meantime I opened a TSI case, provided a sample project and already got response: The technician thinks this might be a bug and asked me to create a bug report. He also told me that he is going to assign the bug report directly to the HealthKit team.
I am working on creating a bug report until noon (CEST).
Going to provide updates here...
Topic:
App & System Services
SubTopic:
Core OS
Tags: