Quick Workaround*
Download Adobe Acrobat Reader DC (free, Pro is the upgrade).
In the print dialog, select "Advanced" at the top next to your selected printer. 2/3 of the way down the pop-up dialog window, find "Print as Image."
This will "flatten" the PDF and print it as seen. It seems either the driver or the way Preview processes PDFs when sending to the printer doesn't do a good job of "flattening" the content on a PDF page into a printable image and it omits anything generated from a document processor or that was annotated or added after.
Topic:
App & System Services
SubTopic:
Core OS
Tags: