Yes, we have to handle the situation of maintaining multiple Apple Pay domain verification files at my employer as well. We just swap them out as needed since you can only host a single domain verification file at a time. In practice, it looks like once the file is verified, Apple doesn't seem to check it again since your domain is already validated. As our company continues to integrate with different payment gateways / providers, we just replace the domain verification file with the new one and verify the new one.
Topic:
App & System Services
SubTopic:
Apple Pay
Tags: